Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdc40Q9DC48 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdc40Q9DC48 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Gm13385-201ENSMUST00000121089 220 ntBASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdc40Q9DC48 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Gm4984-201ENSMUST00000115987 360 ntBASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Gm24420-201ENSMUST00000176676 59 ntBASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Gm8927-201ENSMUST00000181978 981 ntBASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Gm28911-201ENSMUST00000188837 117 ntBASIC12.5□□□□□ -0.41
Cdc40Q9DC48 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Gm3222-201ENSMUST00000071282 990 ntBASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Matn2-206ENSMUST00000228570 2798 ntBASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cdc40Q9DC48 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.49□□□□□ -0.41
Cdc40Q9DC48 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms