Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Chmp2aQ9DB34 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2aQ9DB34 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.03□□□□□ -0.16
Chmp2aQ9DB34 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Chmp2aQ9DB34 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.02□□□□□ -0.16
Chmp2aQ9DB34 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp2aQ9DB34 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp2aQ9DB34 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp2aQ9DB34 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp2aQ9DB34 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp2aQ9DB34 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp2aQ9DB34 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Chmp2aQ9DB34 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp2aQ9DB34 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp2aQ9DB34 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp2aQ9DB34 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp2aQ9DB34 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp2aQ9DB34 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp2aQ9DB34 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Chmp2aQ9DB34 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp2aQ9DB34 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.02□□□□□ -0.16
Chmp2aQ9DB34 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp2aQ9DB34 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Gm11424-201ENSMUST00000121929 829 ntBASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Gm12138-201ENSMUST00000122180 951 ntBASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.02□□□□□ -0.17
Chmp2aQ9DB34 Gm9794-201ENSMUST00000202370 423 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms