Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssmem1Q9D9Y8 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Mir1894-201ENSMUST00000122802 81 ntBASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Gm6244-201ENSMUST00000178732 841 ntBASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Gm27892-201ENSMUST00000185017 106 ntBASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Gm29608-201ENSMUST00000190444 463 ntBASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Gm7287-201ENSMUST00000205267 602 ntBASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssmem1Q9D9Y8 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ssmem1Q9D9Y8 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms