Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Matn2-206ENSMUST00000228570 2798 ntBASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Gm12403-201ENSMUST00000121384 959 ntBASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC16.94■□□□□ 0.3
Chmp4bQ9D8B3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp4bQ9D8B3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp4bQ9D8B3 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms