Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
U2af1Q9D883 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
U2af1Q9D883 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
U2af1Q9D883 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
U2af1Q9D883 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
U2af1Q9D883 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
U2af1Q9D883 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
U2af1Q9D883 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
U2af1Q9D883 Gm12390-201ENSMUST00000117897 397 ntBASIC17.67■□□□□ 0.42
U2af1Q9D883 Gm15824-201ENSMUST00000119516 955 ntBASIC17.67■□□□□ 0.42
U2af1Q9D883 Gm11803-201ENSMUST00000119966 444 ntBASIC17.67■□□□□ 0.42
U2af1Q9D883 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
U2af1Q9D883 Proscos-202ENSMUST00000178990 666 ntBASIC17.67■□□□□ 0.42
U2af1Q9D883 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
U2af1Q9D883 Gm27847-201ENSMUST00000183711 107 ntBASIC17.67■□□□□ 0.42
U2af1Q9D883 Gm27375-201ENSMUST00000183799 107 ntBASIC17.67■□□□□ 0.42
U2af1Q9D883 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
U2af1Q9D883 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
U2af1Q9D883 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
U2af1Q9D883 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
U2af1Q9D883 Gm6091-201ENSMUST00000098307 165 ntBASIC17.67■□□□□ 0.42
U2af1Q9D883 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
U2af1Q9D883 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
U2af1Q9D883 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
U2af1Q9D883 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
U2af1Q9D883 Gm19863-201ENSMUST00000192480 2218 ntBASIC17.67■□□□□ 0.42
U2af1Q9D883 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
U2af1Q9D883 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
U2af1Q9D883 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
U2af1Q9D883 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
U2af1Q9D883 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
U2af1Q9D883 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
U2af1Q9D883 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
U2af1Q9D883 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
U2af1Q9D883 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC17.66■□□□□ 0.42
U2af1Q9D883 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC17.66■□□□□ 0.42
U2af1Q9D883 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
U2af1Q9D883 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
U2af1Q9D883 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
U2af1Q9D883 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC17.66■□□□□ 0.42
U2af1Q9D883 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
U2af1Q9D883 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC17.66■□□□□ 0.42
U2af1Q9D883 Gm25857-201ENSMUST00000082788 129 ntBASIC17.66■□□□□ 0.42
U2af1Q9D883 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
U2af1Q9D883 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
U2af1Q9D883 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
U2af1Q9D883 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
U2af1Q9D883 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
U2af1Q9D883 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC17.66■□□□□ 0.42
U2af1Q9D883 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
U2af1Q9D883 Gm10729-202ENSMUST00000193403 1375 ntBASIC17.66■□□□□ 0.42
U2af1Q9D883 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
U2af1Q9D883 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
U2af1Q9D883 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
U2af1Q9D883 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC17.65■□□□□ 0.42
U2af1Q9D883 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC17.65■□□□□ 0.42
U2af1Q9D883 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
U2af1Q9D883 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
U2af1Q9D883 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
U2af1Q9D883 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
U2af1Q9D883 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.65■□□□□ 0.42
U2af1Q9D883 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.65■□□□□ 0.42
U2af1Q9D883 Gm8810-201ENSMUST00000172895 754 ntBASIC17.65■□□□□ 0.42
U2af1Q9D883 Gm24196-201ENSMUST00000179161 110 ntBASIC17.65■□□□□ 0.42
U2af1Q9D883 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
U2af1Q9D883 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
U2af1Q9D883 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
U2af1Q9D883 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC17.65■□□□□ 0.42
U2af1Q9D883 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
U2af1Q9D883 Gm13050-201ENSMUST00000122149 1345 ntBASIC17.65■□□□□ 0.42
U2af1Q9D883 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
U2af1Q9D883 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
U2af1Q9D883 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
U2af1Q9D883 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
U2af1Q9D883 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
U2af1Q9D883 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
U2af1Q9D883 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
U2af1Q9D883 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
U2af1Q9D883 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
U2af1Q9D883 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
U2af1Q9D883 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
U2af1Q9D883 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC17.64■□□□□ 0.42
U2af1Q9D883 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC17.64■□□□□ 0.42
U2af1Q9D883 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC17.64■□□□□ 0.42
U2af1Q9D883 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
U2af1Q9D883 Gm2420-202ENSMUST00000202224 2249 ntBASIC17.64■□□□□ 0.42
U2af1Q9D883 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
U2af1Q9D883 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
U2af1Q9D883 Zscan30-202ENSMUST00000224144 1458 ntBASIC17.64■□□□□ 0.41
U2af1Q9D883 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
U2af1Q9D883 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
U2af1Q9D883 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
U2af1Q9D883 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
U2af1Q9D883 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC17.64■□□□□ 0.41
U2af1Q9D883 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC17.64■□□□□ 0.41
U2af1Q9D883 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
U2af1Q9D883 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC17.64■□□□□ 0.41
U2af1Q9D883 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
U2af1Q9D883 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC17.64■□□□□ 0.41
U2af1Q9D883 AC114008.2-201ENSMUST00000227699 1347 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms