Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Gm42550-201ENSMUST00000201553 960 ntBASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Gm6983-201ENSMUST00000214912 628 ntBASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Gm17330-201ENSMUST00000221047 165 ntBASIC13.79□□□□□ -0.2
Vps28Q9D1C8 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Gm5356-201ENSMUST00000093326 615 ntBASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps28Q9D1C8 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vps28Q9D1C8 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vps28Q9D1C8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vps28Q9D1C8 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Gm2495-201ENSMUST00000191160 466 ntBASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms