Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Gm3436-201ENSMUST00000179930 840 ntBASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Gm9229-201ENSMUST00000222777 126 ntBASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rpusd4Q9CWX4 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Gm46209-201ENSMUST00000217912 553 ntBASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rpusd4Q9CWX4 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 BC043934-202ENSMUST00000185694 2356 ntBASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.41□□□□□ -0.58
Rpusd4Q9CWX4 Gm43703-201ENSMUST00000200523 763 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms