Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Gm14701-201ENSMUST00000117156 348 ntBASIC15.84■□□□□ 0.13
Smc3Q9CW03 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Gm22175-201ENSMUST00000175007 78 ntBASIC15.84■□□□□ 0.13
Smc3Q9CW03 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.83■□□□□ 0.13
Smc3Q9CW03 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smc3Q9CW03 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smc3Q9CW03 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smc3Q9CW03 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.13
Smc3Q9CW03 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Gm23935-201ENSMUST00000102303 57 ntBASIC15.83■□□□□ 0.12
Smc3Q9CW03 Gm24270-201ENSMUST00000102326 57 ntBASIC15.83■□□□□ 0.12
Smc3Q9CW03 Gm14767-201ENSMUST00000121559 586 ntBASIC15.83■□□□□ 0.12
Smc3Q9CW03 Gm24245-201ENSMUST00000157318 57 ntBASIC15.83■□□□□ 0.12
Smc3Q9CW03 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Gm27680-201ENSMUST00000184192 160 ntBASIC15.83■□□□□ 0.12
Smc3Q9CW03 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Gm27321-201ENSMUST00000185021 205 ntBASIC15.83■□□□□ 0.12
Smc3Q9CW03 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Gm43575-201ENSMUST00000196420 516 ntBASIC15.83■□□□□ 0.12
Smc3Q9CW03 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.83■□□□□ 0.12
Smc3Q9CW03 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc3Q9CW03 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc3Q9CW03 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.82■□□□□ 0.12
Smc3Q9CW03 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc3Q9CW03 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Smc3Q9CW03 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smc3Q9CW03 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms