Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.75□□□□□ -0.37
Otud1Q9CUB6 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Gm38671-201ENSMUST00000200573 130 ntBASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Gm44719-201ENSMUST00000206404 149 ntBASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Otud1Q9CUB6 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Gm13829-201ENSMUST00000119600 138 ntBASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Gm26315-201ENSMUST00000083890 321 ntBASIC12.74□□□□□ -0.37
Otud1Q9CUB6 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Otud1Q9CUB6 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Otud1Q9CUB6 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Otud1Q9CUB6 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Otud1Q9CUB6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Otud1Q9CUB6 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Otud1Q9CUB6 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Otud1Q9CUB6 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Otud1Q9CUB6 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Otud1Q9CUB6 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Otud1Q9CUB6 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Otud1Q9CUB6 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Otud1Q9CUB6 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Otud1Q9CUB6 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Otud1Q9CUB6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Otud1Q9CUB6 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Otud1Q9CUB6 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Otud1Q9CUB6 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Otud1Q9CUB6 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Otud1Q9CUB6 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms