Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Gm12217-201ENSMUST00000118858 696 ntBASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Gm15276-201ENSMUST00000145953 498 ntBASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Gm13097-201ENSMUST00000210722 397 ntBASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cldnd1Q9CQX5 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldnd1Q9CQX5 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Gm23270-201ENSMUST00000104055 131 ntBASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.68□□□□□ -0.22
Cldnd1Q9CQX5 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms