Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Gm3809-201ENSMUST00000180973 1006 ntBASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTRAFQ9CQE8 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTRAFQ9CQE8 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms