Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim16Q99PP9 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.17□□□□□ -0.3
Trim16Q99PP9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim16Q99PP9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.17□□□□□ -0.3
Trim16Q99PP9 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Rubie-203ENSMUST00000227803 2430 ntBASIC13.17□□□□□ -0.3
Trim16Q99PP9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.17□□□□□ -0.3
Trim16Q99PP9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Gm29667-201ENSMUST00000190817 490 ntBASIC13.17□□□□□ -0.3
Trim16Q99PP9 Gm10766-202ENSMUST00000194123 606 ntBASIC13.17□□□□□ -0.3
Trim16Q99PP9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.17□□□□□ -0.3
Trim16Q99PP9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim16Q99PP9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim16Q99PP9 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim16Q99PP9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim16Q99PP9 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trim16Q99PP9 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Trim16Q99PP9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim16Q99PP9 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.15□□□□□ -0.3
Trim16Q99PP9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim16Q99PP9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim16Q99PP9 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trim16Q99PP9 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim16Q99PP9 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.15□□□□□ -0.3
Trim16Q99PP9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim16Q99PP9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim16Q99PP9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim16Q99PP9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim16Q99PP9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.15□□□□□ -0.3
Trim16Q99PP9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.15□□□□□ -0.3
Trim16Q99PP9 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim16Q99PP9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.15□□□□□ -0.3
Trim16Q99PP9 Gm4804-201ENSMUST00000182234 999 ntBASIC13.15□□□□□ -0.3
Trim16Q99PP9 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim16Q99PP9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim16Q99PP9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms