Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm38341-201ENSMUST00000195357 515 ntBASIC16.53■□□□□ 0.24
Trim34aQ99PP6 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim34aQ99PP6 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim34aQ99PP6 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim34aQ99PP6 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim34aQ99PP6 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC16.53■□□□□ 0.24
Trim34aQ99PP6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim34aQ99PP6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim34aQ99PP6 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim34aQ99PP6 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim34aQ99PP6 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim34aQ99PP6 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim34aQ99PP6 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim34aQ99PP6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim34aQ99PP6 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim34aQ99PP6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim34aQ99PP6 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim34aQ99PP6 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim34aQ99PP6 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim34aQ99PP6 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim34aQ99PP6 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim34aQ99PP6 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim34aQ99PP6 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim34aQ99PP6 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trim34aQ99PP6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim34aQ99PP6 Gm11591-201ENSMUST00000120063 702 ntBASIC16.52■□□□□ 0.24
Trim34aQ99PP6 Gm13786-201ENSMUST00000122371 333 ntBASIC16.52■□□□□ 0.24
Trim34aQ99PP6 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim34aQ99PP6 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trim34aQ99PP6 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC16.52■□□□□ 0.24
Trim34aQ99PP6 Gm4959-201ENSMUST00000197271 1044 ntBASIC16.52■□□□□ 0.24
Trim34aQ99PP6 Gm6334-201ENSMUST00000207083 228 ntBASIC16.52■□□□□ 0.24
Trim34aQ99PP6 AC122305.4-201ENSMUST00000216159 1206 ntBASIC16.52■□□□□ 0.24
Trim34aQ99PP6 Gm24526-201ENSMUST00000082921 158 ntBASIC16.52■□□□□ 0.24
Trim34aQ99PP6 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim34aQ99PP6 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim34aQ99PP6 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim34aQ99PP6 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim34aQ99PP6 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC16.52■□□□□ 0.23
Trim34aQ99PP6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trim34aQ99PP6 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim34aQ99PP6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim34aQ99PP6 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
Trim34aQ99PP6 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim34aQ99PP6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim34aQ99PP6 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim34aQ99PP6 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim34aQ99PP6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim34aQ99PP6 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim34aQ99PP6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim34aQ99PP6 Gm26185-201ENSMUST00000157692 266 ntBASIC16.51■□□□□ 0.23
Trim34aQ99PP6 Gm45865-201ENSMUST00000211815 945 ntBASIC16.51■□□□□ 0.23
Trim34aQ99PP6 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC16.51■□□□□ 0.23
Trim34aQ99PP6 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim34aQ99PP6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim34aQ99PP6 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim34aQ99PP6 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.51■□□□□ 0.23
Trim34aQ99PP6 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim34aQ99PP6 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Trim34aQ99PP6 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Trim34aQ99PP6 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.51■□□□□ 0.23
Trim34aQ99PP6 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim34aQ99PP6 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Gm11658-201ENSMUST00000120913 1008 ntBASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Gm5637-201ENSMUST00000153890 1119 ntBASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Gm2467-201ENSMUST00000182266 1010 ntBASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Gm6981-201ENSMUST00000182467 1008 ntBASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Gm19163-201ENSMUST00000223313 780 ntBASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Gm7899-201ENSMUST00000192935 1897 ntBASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim34aQ99PP6 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms