Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh23Q99PF4 Gm14460-201ENSMUST00000121511 639 ntBASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Arhgef33-207ENSMUST00000224966 490 ntBASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Gm25951-201ENSMUST00000175330 64 ntBASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Gm44651-201ENSMUST00000207343 372 ntBASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh23Q99PF4 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Gm12015-201ENSMUST00000117065 843 ntBASIC13.34□□□□□ -0.27
Cdh23Q99PF4 Gm11801-201ENSMUST00000117807 746 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms