Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.46□□□□□ -0.09
Tlr3Q99MB1 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.46□□□□□ -0.09
Tlr3Q99MB1 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.46□□□□□ -0.09
Tlr3Q99MB1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tlr3Q99MB1 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.46□□□□□ -0.09
Tlr3Q99MB1 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tlr3Q99MB1 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tlr3Q99MB1 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tlr3Q99MB1 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tlr3Q99MB1 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tlr3Q99MB1 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tlr3Q99MB1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Tlr3Q99MB1 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Tlr3Q99MB1 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tlr3Q99MB1 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tlr3Q99MB1 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tlr3Q99MB1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Gm13829-201ENSMUST00000119600 138 ntBASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.45□□□□□ -0.1
Tlr3Q99MB1 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tlr3Q99MB1 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.44□□□□□ -0.1
Tlr3Q99MB1 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tlr3Q99MB1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tlr3Q99MB1 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms