Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp1b1Q99LU0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Gm27306-201ENSMUST00000183970 107 ntBASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Mir497b-201ENSMUST00000093601 125 ntBASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Chmp1b1Q99LU0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Gm8927-201ENSMUST00000181978 981 ntBASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Gm3222-201ENSMUST00000071282 990 ntBASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp1b1Q99LU0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms