Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cstf3Q99LI7 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.02□□□□□ -0.32
Cstf3Q99LI7 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cstf3Q99LI7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Cstf3Q99LI7 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Cstf3Q99LI7 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.02□□□□□ -0.32
Cstf3Q99LI7 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cstf3Q99LI7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cstf3Q99LI7 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cstf3Q99LI7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cstf3Q99LI7 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.02□□□□□ -0.32
Cstf3Q99LI7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cstf3Q99LI7 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cstf3Q99LI7 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cstf3Q99LI7 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.02□□□□□ -0.32
Cstf3Q99LI7 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.02□□□□□ -0.33
Cstf3Q99LI7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.02□□□□□ -0.33
Cstf3Q99LI7 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Gm27306-201ENSMUST00000183970 107 ntBASIC13.01□□□□□ -0.33
Cstf3Q99LI7 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.01□□□□□ -0.33
Cstf3Q99LI7 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cstf3Q99LI7 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13□□□□□ -0.33
Cstf3Q99LI7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Cstf3Q99LI7 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cstf3Q99LI7 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13□□□□□ -0.33
Cstf3Q99LI7 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13□□□□□ -0.33
Cstf3Q99LI7 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13□□□□□ -0.33
Cstf3Q99LI7 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13□□□□□ -0.33
Cstf3Q99LI7 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cstf3Q99LI7 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cstf3Q99LI7 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms