Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Rab28Q99KL7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab28Q99KL7 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Rab28Q99KL7 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab28Q99KL7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rab28Q99KL7 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.98□□□□□ -0.33
Rab28Q99KL7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rab28Q99KL7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.98□□□□□ -0.33
Rab28Q99KL7 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rab28Q99KL7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.98□□□□□ -0.33
Rab28Q99KL7 Gm38671-201ENSMUST00000200573 130 ntBASIC12.98□□□□□ -0.33
Rab28Q99KL7 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.98□□□□□ -0.33
Rab28Q99KL7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab28Q99KL7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab28Q99KL7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rab28Q99KL7 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab28Q99KL7 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rab28Q99KL7 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab28Q99KL7 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Rab28Q99KL7 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Rab28Q99KL7 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.98□□□□□ -0.33
Rab28Q99KL7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab28Q99KL7 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab28Q99KL7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab28Q99KL7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab28Q99KL7 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.98□□□□□ -0.33
Rab28Q99KL7 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.97□□□□□ -0.33
Rab28Q99KL7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.97□□□□□ -0.33
Rab28Q99KL7 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Gm13612-201ENSMUST00000119276 390 ntBASIC12.97□□□□□ -0.33
Rab28Q99KL7 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.97□□□□□ -0.33
Rab28Q99KL7 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.97□□□□□ -0.33
Rab28Q99KL7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.97□□□□□ -0.33
Rab28Q99KL7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.97□□□□□ -0.33
Rab28Q99KL7 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab28Q99KL7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.96□□□□□ -0.33
Rab28Q99KL7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.96□□□□□ -0.33
Rab28Q99KL7 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Gm5035-201ENSMUST00000215581 927 ntBASIC12.96□□□□□ -0.33
Rab28Q99KL7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.96□□□□□ -0.33
Rab28Q99KL7 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.96□□□□□ -0.33
Rab28Q99KL7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab28Q99KL7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rab28Q99KL7 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms