Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc4Q99J62 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc4Q99J62 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc4Q99J62 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.46■□□□□ 0.07
Rfc4Q99J62 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc4Q99J62 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Rfc4Q99J62 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rfc4Q99J62 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Gm15370-201ENSMUST00000117158 253 ntBASIC15.45■□□□□ 0.06
Rfc4Q99J62 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.45■□□□□ 0.06
Rfc4Q99J62 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Gm2991-201ENSMUST00000173338 480 ntBASIC15.45■□□□□ 0.06
Rfc4Q99J62 Gm37259-201ENSMUST00000193903 849 ntBASIC15.45■□□□□ 0.06
Rfc4Q99J62 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.45■□□□□ 0.06
Rfc4Q99J62 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Gm8227-201ENSMUST00000223306 571 ntBASIC15.45■□□□□ 0.06
Rfc4Q99J62 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc4Q99J62 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.45■□□□□ 0.06
Rfc4Q99J62 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.45■□□□□ 0.06
Rfc4Q99J62 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.45■□□□□ 0.06
Rfc4Q99J62 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Gm6023-201ENSMUST00000118217 606 ntBASIC15.44■□□□□ 0.06
Rfc4Q99J62 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.44■□□□□ 0.06
Rfc4Q99J62 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.44■□□□□ 0.06
Rfc4Q99J62 Gm26461-201ENSMUST00000175064 290 ntBASIC15.44■□□□□ 0.06
Rfc4Q99J62 Gm6222-202ENSMUST00000182143 629 ntBASIC15.44■□□□□ 0.06
Rfc4Q99J62 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfc4Q99J62 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfc4Q99J62 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.44■□□□□ 0.06
Rfc4Q99J62 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Gm7993-201ENSMUST00000200970 1384 ntBASIC15.44■□□□□ 0.06
Rfc4Q99J62 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Rfc4Q99J62 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms