Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.54■□□□□ 0.08
Smc1bQ920F6 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1bQ920F6 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.53■□□□□ 0.08
Smc1bQ920F6 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.53■□□□□ 0.08
Smc1bQ920F6 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Gm38671-201ENSMUST00000200573 130 ntBASIC15.53■□□□□ 0.08
Smc1bQ920F6 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.53■□□□□ 0.08
Smc1bQ920F6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.53■□□□□ 0.08
Smc1bQ920F6 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.53■□□□□ 0.08
Smc1bQ920F6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1bQ920F6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Gm13612-201ENSMUST00000119276 390 ntBASIC15.52■□□□□ 0.08
Smc1bQ920F6 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Gm38241-201ENSMUST00000192641 898 ntBASIC15.52■□□□□ 0.08
Smc1bQ920F6 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc1bQ920F6 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smc1bQ920F6 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smc1bQ920F6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smc1bQ920F6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smc1bQ920F6 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Smc1bQ920F6 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Smc1bQ920F6 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smc1bQ920F6 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smc1bQ920F6 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Smc1bQ920F6 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Smc1bQ920F6 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smc1bQ920F6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Smc1bQ920F6 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.52■□□□□ 0.07
Smc1bQ920F6 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc1bQ920F6 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc1bQ920F6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.51■□□□□ 0.07
Smc1bQ920F6 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Smc1bQ920F6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc1bQ920F6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.51■□□□□ 0.07
Smc1bQ920F6 Gm15236-201ENSMUST00000117309 379 ntBASIC15.51■□□□□ 0.07
Smc1bQ920F6 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smc1bQ920F6 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.51■□□□□ 0.07
Smc1bQ920F6 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.51■□□□□ 0.07
Smc1bQ920F6 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.51■□□□□ 0.07
Smc1bQ920F6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.51■□□□□ 0.07
Smc1bQ920F6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.51■□□□□ 0.07
Smc1bQ920F6 Gm3961-201ENSMUST00000204425 994 ntBASIC15.51■□□□□ 0.07
Smc1bQ920F6 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Smc1bQ920F6 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc1bQ920F6 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc1bQ920F6 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smc1bQ920F6 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Smc1bQ920F6 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc1bQ920F6 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc1bQ920F6 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc1bQ920F6 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc1bQ920F6 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc1bQ920F6 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms