Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha3Q91Y16 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdha3Q91Y16 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Pcdha3Q91Y16 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Pcdha3Q91Y16 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Gm9794-201ENSMUST00000202370 423 ntBASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Gm18307-201ENSMUST00000206864 949 ntBASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha3Q91Y16 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Gm14928-201ENSMUST00000120198 477 ntBASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Gm23984-201ENSMUST00000157139 203 ntBASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Gm6745-201ENSMUST00000199216 526 ntBASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Gm6180-201ENSMUST00000065243 498 ntBASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdha3Q91Y16 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha3Q91Y16 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha3Q91Y16 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha3Q91Y16 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha3Q91Y16 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha3Q91Y16 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha3Q91Y16 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha3Q91Y16 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha3Q91Y16 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha3Q91Y16 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha3Q91Y16 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha3Q91Y16 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha3Q91Y16 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha3Q91Y16 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms