Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Gm20949-201ENSMUST00000206478 952 ntBASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha8Q91Y12 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Gm15770-201ENSMUST00000117498 584 ntBASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Syt7-204ENSMUST00000223586 1344 ntBASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdha8Q91Y12 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Gm9797-201ENSMUST00000052902 613 ntBASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha8Q91Y12 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.1□□□□□ -0.31
Pcdha8Q91Y12 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms