Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhb20Q91XZ9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdhb20Q91XZ9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhb20Q91XZ9 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhb20Q91XZ9 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhb20Q91XZ9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb20Q91XZ9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb20Q91XZ9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdhb20Q91XZ9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdhb20Q91XZ9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdhb20Q91XZ9 Gm44897-201ENSMUST00000206187 1341 ntBASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Gm6912-201ENSMUST00000117218 544 ntBASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Gm8584-201ENSMUST00000171982 758 ntBASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Platr10-202ENSMUST00000191479 818 ntBASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 AC105408.1-201ENSMUST00000227771 802 ntBASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Aebp2-205ENSMUST00000160836 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb20Q91XZ9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Gm25414-201ENSMUST00000101814 107 ntBASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Gm19231-201ENSMUST00000193212 830 ntBASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Gm17795-201ENSMUST00000214505 757 ntBASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 AC151902.1-201ENSMUST00000227800 375 ntBASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb20Q91XZ9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms