Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Gm27989-201ENSMUST00000184721 107 ntBASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Mir497b-201ENSMUST00000093601 125 ntBASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga3Q91XY5 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga3Q91XY5 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga3Q91XY5 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga3Q91XY5 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga3Q91XY5 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga3Q91XY5 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga3Q91XY5 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga3Q91XY5 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga3Q91XY5 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga3Q91XY5 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga3Q91XY5 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga3Q91XY5 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Gm4875-201ENSMUST00000118257 786 ntBASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Gm8927-201ENSMUST00000181978 981 ntBASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Gm3222-201ENSMUST00000071282 990 ntBASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga3Q91XY5 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Gm6912-201ENSMUST00000117218 544 ntBASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Gm13385-201ENSMUST00000121089 220 ntBASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga3Q91XY5 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms