Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Gm26464-201ENSMUST00000157094 305 ntBASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Gm5356-201ENSMUST00000093326 615 ntBASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx41Q91VN6 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Ddx41Q91VN6 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Ddx41Q91VN6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ddx41Q91VN6 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ddx41Q91VN6 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Gm18062-201ENSMUST00000208020 547 ntBASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Gm18055-201ENSMUST00000208254 547 ntBASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Gm27196-201ENSMUST00000184787 2582 ntBASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.45■□□□□ 0.06
Ddx41Q91VN6 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Ddx41Q91VN6 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Mir1894-201ENSMUST00000122802 81 ntBASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Gm27772-201ENSMUST00000184900 187 ntBASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Gm8463-201ENSMUST00000208573 613 ntBASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.44■□□□□ 0.06
Ddx41Q91VN6 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.44■□□□□ 0.06
Ddx41Q91VN6 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ddx41Q91VN6 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.43■□□□□ 0.06
Ddx41Q91VN6 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx41Q91VN6 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ddx41Q91VN6 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx41Q91VN6 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx41Q91VN6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx41Q91VN6 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx41Q91VN6 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ddx41Q91VN6 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms