Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tram1Q91V04 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tram1Q91V04 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tram1Q91V04 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.58□□□□□ -0.56
Tram1Q91V04 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.58□□□□□ -0.56
Tram1Q91V04 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tram1Q91V04 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Tram1Q91V04 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Tram1Q91V04 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tram1Q91V04 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tram1Q91V04 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Tram1Q91V04 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.57□□□□□ -0.56
Tram1Q91V04 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.57□□□□□ -0.56
Tram1Q91V04 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.57□□□□□ -0.56
Tram1Q91V04 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Tram1Q91V04 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.57□□□□□ -0.56
Tram1Q91V04 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Tram1Q91V04 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Tram1Q91V04 Gm15678-201ENSMUST00000117573 960 ntBASIC11.57□□□□□ -0.56
Tram1Q91V04 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.57□□□□□ -0.56
Tram1Q91V04 Gm6222-201ENSMUST00000120787 396 ntBASIC11.57□□□□□ -0.56
Tram1Q91V04 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Tram1Q91V04 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.57□□□□□ -0.56
Tram1Q91V04 Rpph1-201ENSMUST00000175096 319 ntBASIC11.57□□□□□ -0.56
Tram1Q91V04 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.57□□□□□ -0.56
Tram1Q91V04 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.57□□□□□ -0.56
Tram1Q91V04 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.57□□□□□ -0.56
Tram1Q91V04 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.57□□□□□ -0.56
Tram1Q91V04 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Tram1Q91V04 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.57□□□□□ -0.56
Tram1Q91V04 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Tram1Q91V04 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.57□□□□□ -0.56
Tram1Q91V04 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Tram1Q91V04 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.57□□□□□ -0.56
Tram1Q91V04 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tram1Q91V04 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tram1Q91V04 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tram1Q91V04 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.56□□□□□ -0.56
Tram1Q91V04 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Tram1Q91V04 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tram1Q91V04 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tram1Q91V04 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tram1Q91V04 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Tram1Q91V04 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Tram1Q91V04 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tram1Q91V04 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.56□□□□□ -0.56
Tram1Q91V04 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tram1Q91V04 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Tram1Q91V04 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Tram1Q91V04 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tram1Q91V04 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tram1Q91V04 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tram1Q91V04 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tram1Q91V04 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Tram1Q91V04 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.56□□□□□ -0.56
Tram1Q91V04 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tram1Q91V04 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tram1Q91V04 Gm5364-201ENSMUST00000216789 889 ntBASIC11.56□□□□□ -0.56
Tram1Q91V04 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tram1Q91V04 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Tram1Q91V04 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tram1Q91V04 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tram1Q91V04 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tram1Q91V04 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.56□□□□□ -0.56
Tram1Q91V04 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Tram1Q91V04 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.56□□□□□ -0.56
Tram1Q91V04 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tram1Q91V04 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tram1Q91V04 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tram1Q91V04 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Tram1Q91V04 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tram1Q91V04 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms