Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.32□□□□□ -0.12
TraipQ8VIG6 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.32□□□□□ -0.12
TraipQ8VIG6 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TraipQ8VIG6 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.31□□□□□ -0.12
TraipQ8VIG6 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Gm13123-201ENSMUST00000122173 492 ntBASIC14.31□□□□□ -0.12
TraipQ8VIG6 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.31□□□□□ -0.12
TraipQ8VIG6 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.31□□□□□ -0.12
TraipQ8VIG6 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Gm10268-201ENSMUST00000085340 555 ntBASIC14.31□□□□□ -0.12
TraipQ8VIG6 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TraipQ8VIG6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TraipQ8VIG6 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Gm43636-201ENSMUST00000201501 2235 ntBASIC14.3□□□□□ -0.12
TraipQ8VIG6 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TraipQ8VIG6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Gm16202-201ENSMUST00000117532 544 ntBASIC14.3□□□□□ -0.12
TraipQ8VIG6 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.3□□□□□ -0.12
TraipQ8VIG6 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TraipQ8VIG6 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TraipQ8VIG6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.3□□□□□ -0.12
TraipQ8VIG6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TraipQ8VIG6 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms