Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.94□□□□□ -0.18
Trim60Q8VI40 Gm14767-201ENSMUST00000121559 586 ntBASIC13.94□□□□□ -0.18
Trim60Q8VI40 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.94□□□□□ -0.18
Trim60Q8VI40 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.94□□□□□ -0.18
Trim60Q8VI40 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.93□□□□□ -0.18
Trim60Q8VI40 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.93□□□□□ -0.18
Trim60Q8VI40 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim60Q8VI40 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Gm44344-201ENSMUST00000200287 129 ntBASIC13.93□□□□□ -0.18
Trim60Q8VI40 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Gm8396-201ENSMUST00000057361 823 ntBASIC13.93□□□□□ -0.18
Trim60Q8VI40 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim60Q8VI40 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim60Q8VI40 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Syt7-205ENSMUST00000224135 1557 ntBASIC13.92□□□□□ -0.18
Trim60Q8VI40 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Gm18905-201ENSMUST00000205454 928 ntBASIC13.92□□□□□ -0.18
Trim60Q8VI40 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms