Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr1Q8VHP6 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr1Q8VHP6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr1Q8VHP6 Matn2-206ENSMUST00000228570 2798 ntBASIC13.2□□□□□ -0.3
Cdhr1Q8VHP6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr1Q8VHP6 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr1Q8VHP6 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr1Q8VHP6 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr1Q8VHP6 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.2□□□□□ -0.3
Cdhr1Q8VHP6 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Gm12403-201ENSMUST00000121384 959 ntBASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Gm8062-201ENSMUST00000139696 444 ntBASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Gm22331-201ENSMUST00000158066 136 ntBASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Gm8810-201ENSMUST00000172895 754 ntBASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Itm2b-204ENSMUST00000228637 783 ntBASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr1Q8VHP6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Proscos-202ENSMUST00000178990 666 ntBASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Gm26315-201ENSMUST00000083890 321 ntBASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr1Q8VHP6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr1Q8VHP6 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr1Q8VHP6 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms