Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm7287-201ENSMUST00000205267 602 ntBASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ndc1Q8VCB1 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
Ndc1Q8VCB1 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ndc1Q8VCB1 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ndc1Q8VCB1 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ndc1Q8VCB1 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ndc1Q8VCB1 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ndc1Q8VCB1 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ndc1Q8VCB1 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ndc1Q8VCB1 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ndc1Q8VCB1 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ndc1Q8VCB1 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Ndc1Q8VCB1 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Ndc1Q8VCB1 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ndc1Q8VCB1 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Gm12390-201ENSMUST00000117897 397 ntBASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Ndc1Q8VCB1 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms