Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc9Q8VC31 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Gm25990-201ENSMUST00000102440 86 ntBASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Gm13418-201ENSMUST00000119097 944 ntBASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Gm6376-201ENSMUST00000209407 580 ntBASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Gm45484-201ENSMUST00000210310 1141 ntBASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc9Q8VC31 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Gm27646-201ENSMUST00000183989 110 ntBASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Gm6089-201ENSMUST00000197666 938 ntBASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ccdc9Q8VC31 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Ccdc9Q8VC31 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 CT025681.1-201ENSMUST00000225453 1855 ntBASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 AC241621.2-201ENSMUST00000223991 2151 ntBASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms