Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Gm9824-201ENSMUST00000178707 561 ntBASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nudcd3Q8R1N4 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Gm18766-201ENSMUST00000189811 808 ntBASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Dupd1-202ENSMUST00000224735 548 ntBASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nudcd3Q8R1N4 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Gm33320-201ENSMUST00000192232 530 ntBASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms