Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Gm28659-201ENSMUST00000188013 759 ntBASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Gm44771-201ENSMUST00000206975 626 ntBASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.24□□□□□ -0.45
Ebf4Q8K4J2 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Gm37714-201ENSMUST00000194742 342 ntBASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf4Q8K4J2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms