Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Gm11524-201ENSMUST00000119349 807 ntBASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Gm5186-201ENSMUST00000218781 920 ntBASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfwd3Q8CIK8 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Gm37917-201ENSMUST00000194711 392 ntBASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Gm15823-201ENSMUST00000064305 670 ntBASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfwd3Q8CIK8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfwd3Q8CIK8 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfwd3Q8CIK8 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Rfwd3Q8CIK8 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfwd3Q8CIK8 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rfwd3Q8CIK8 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfwd3Q8CIK8 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Rfwd3Q8CIK8 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfwd3Q8CIK8 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfwd3Q8CIK8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfwd3Q8CIK8 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.65□□□□□ -0.38
Rfwd3Q8CIK8 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.65□□□□□ -0.38
Rfwd3Q8CIK8 Gm26464-201ENSMUST00000157094 305 ntBASIC12.65□□□□□ -0.38
Rfwd3Q8CIK8 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms