Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab43Q8CG50 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab43Q8CG50 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab43Q8CG50 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab43Q8CG50 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rab43Q8CG50 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab43Q8CG50 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab43Q8CG50 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.12□□□□□ -0.31
Rab43Q8CG50 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rab43Q8CG50 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab43Q8CG50 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab43Q8CG50 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab43Q8CG50 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab43Q8CG50 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab43Q8CG50 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Rab43Q8CG50 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab43Q8CG50 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rab43Q8CG50 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rab43Q8CG50 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Gm26927-201ENSMUST00000182385 965 ntBASIC13.11□□□□□ -0.31
Rab43Q8CG50 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Gm9257-201ENSMUST00000221254 232 ntBASIC13.11□□□□□ -0.31
Rab43Q8CG50 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Gm9823-201ENSMUST00000051212 327 ntBASIC13.11□□□□□ -0.31
Rab43Q8CG50 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.11□□□□□ -0.31
Rab43Q8CG50 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.11□□□□□ -0.31
Rab43Q8CG50 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rab43Q8CG50 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Rab43Q8CG50 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.1□□□□□ -0.31
Rab43Q8CG50 Gm38266-201ENSMUST00000194931 421 ntBASIC13.1□□□□□ -0.31
Rab43Q8CG50 Gm42627-201ENSMUST00000197347 224 ntBASIC13.1□□□□□ -0.31
Rab43Q8CG50 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.1□□□□□ -0.31
Rab43Q8CG50 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.1□□□□□ -0.31
Rab43Q8CG50 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.1□□□□□ -0.31
Rab43Q8CG50 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rab43Q8CG50 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rab43Q8CG50 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rab43Q8CG50 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms