Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Smc5Q8CG46 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Smc5Q8CG46 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Gm14767-201ENSMUST00000121559 586 ntBASIC16.64■□□□□ 0.25
Smc5Q8CG46 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Gm7775-201ENSMUST00000218871 853 ntBASIC16.64■□□□□ 0.25
Smc5Q8CG46 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Gm24447-201ENSMUST00000083977 338 ntBASIC16.64■□□□□ 0.25
Smc5Q8CG46 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc5Q8CG46 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Kcnk16-202ENSMUST00000225596 2127 ntBASIC16.63■□□□□ 0.25
Smc5Q8CG46 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Gm4875-201ENSMUST00000118257 786 ntBASIC16.63■□□□□ 0.25
Smc5Q8CG46 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.63■□□□□ 0.25
Smc5Q8CG46 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.63■□□□□ 0.25
Smc5Q8CG46 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smc5Q8CG46 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC16.62■□□□□ 0.25
Smc5Q8CG46 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc5Q8CG46 AC241621.2-201ENSMUST00000223991 2151 ntBASIC16.62■□□□□ 0.25
Smc5Q8CG46 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc5Q8CG46 Gm28323-201ENSMUST00000186817 2499 ntBASIC16.62■□□□□ 0.25
Smc5Q8CG46 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc5Q8CG46 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smc5Q8CG46 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.62■□□□□ 0.25
Smc5Q8CG46 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smc5Q8CG46 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc5Q8CG46 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Smc5Q8CG46 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smc5Q8CG46 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.62■□□□□ 0.25
Smc5Q8CG46 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc5Q8CG46 Gm2756-201ENSMUST00000195851 400 ntBASIC16.62■□□□□ 0.25
Smc5Q8CG46 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.62■□□□□ 0.25
Smc5Q8CG46 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.62■□□□□ 0.25
Smc5Q8CG46 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smc5Q8CG46 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smc5Q8CG46 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc5Q8CG46 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.62■□□□□ 0.25
Smc5Q8CG46 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms