Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Uba3Q8C878 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Uba3Q8C878 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Uba3Q8C878 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.17□□□□□ -0.14
Uba3Q8C878 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Uba3Q8C878 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Uba3Q8C878 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Uba3Q8C878 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.17□□□□□ -0.14
Uba3Q8C878 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.17□□□□□ -0.14
Uba3Q8C878 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Gm12490-201ENSMUST00000120255 560 ntBASIC14.17□□□□□ -0.14
Uba3Q8C878 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Gm28911-201ENSMUST00000188837 117 ntBASIC14.17□□□□□ -0.14
Uba3Q8C878 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.17□□□□□ -0.14
Uba3Q8C878 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.17□□□□□ -0.14
Uba3Q8C878 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Uba3Q8C878 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Uba3Q8C878 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Uba3Q8C878 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Uba3Q8C878 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Uba3Q8C878 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Uba3Q8C878 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.16□□□□□ -0.14
Uba3Q8C878 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Uba3Q8C878 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Uba3Q8C878 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Uba3Q8C878 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Uba3Q8C878 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Uba3Q8C878 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Uba3Q8C878 Gm11918-201ENSMUST00000121660 179 ntBASIC14.16□□□□□ -0.14
Uba3Q8C878 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.16□□□□□ -0.14
Uba3Q8C878 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Uba3Q8C878 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Uba3Q8C878 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.16□□□□□ -0.14
Uba3Q8C878 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Uba3Q8C878 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Uba3Q8C878 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Uba3Q8C878 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Uba3Q8C878 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
Uba3Q8C878 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.16□□□□□ -0.14
Uba3Q8C878 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.16□□□□□ -0.14
Uba3Q8C878 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Uba3Q8C878 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Uba3Q8C878 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Uba3Q8C878 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Uba3Q8C878 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Uba3Q8C878 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Uba3Q8C878 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Uba3Q8C878 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Uba3Q8C878 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Uba3Q8C878 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Uba3Q8C878 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.15□□□□□ -0.14
Uba3Q8C878 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Uba3Q8C878 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Uba3Q8C878 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.15□□□□□ -0.14
Uba3Q8C878 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Uba3Q8C878 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.15□□□□□ -0.14
Uba3Q8C878 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Uba3Q8C878 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Uba3Q8C878 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Uba3Q8C878 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Uba3Q8C878 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Uba3Q8C878 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Uba3Q8C878 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.15□□□□□ -0.14
Uba3Q8C878 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Uba3Q8C878 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Uba3Q8C878 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.15□□□□□ -0.14
Uba3Q8C878 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.15□□□□□ -0.14
Uba3Q8C878 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.15□□□□□ -0.14
Uba3Q8C878 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Uba3Q8C878 Gm27701-201ENSMUST00000184498 110 ntBASIC14.15□□□□□ -0.14
Uba3Q8C878 Gm38144-201ENSMUST00000192790 465 ntBASIC14.15□□□□□ -0.14
Uba3Q8C878 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.15□□□□□ -0.14
Uba3Q8C878 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Uba3Q8C878 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Uba3Q8C878 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Uba3Q8C878 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Uba3Q8C878 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.15□□□□□ -0.14
Uba3Q8C878 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms