Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Mir5120-201ENSMUST00000175020 78 ntBASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a6Q8C6K9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a6Q8C6K9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Gm16505-201ENSMUST00000179981 232 ntBASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Gm11637-201ENSMUST00000120601 592 ntBASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a6Q8C6K9 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a6Q8C6K9 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms