Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Gm44397-201ENSMUST00000195950 113 ntBASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Gm5276-201ENSMUST00000196683 1047 ntBASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Rn7sk-201ENSMUST00000083103 331 ntBASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Gm26315-201ENSMUST00000083890 321 ntBASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc60Q8C4J0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ccdc60Q8C4J0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ccdc60Q8C4J0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Ccdc60Q8C4J0 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ccdc60Q8C4J0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Gm5912-201ENSMUST00000122282 1438 ntBASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Gm10327-201ENSMUST00000105222 1002 ntBASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc60Q8C4J0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 Gm8463-201ENSMUST00000208573 613 ntBASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 Gm7653-201ENSMUST00000214567 508 ntBASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc60Q8C4J0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms