Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps9d1Q8C190 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Gm27321-201ENSMUST00000185021 205 ntBASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Gm18766-201ENSMUST00000189811 808 ntBASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Gm6916-202ENSMUST00000205523 195 ntBASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps9d1Q8C190 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Mir698-201ENSMUST00000102164 109 ntBASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Gm5566-201ENSMUST00000116118 459 ntBASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Gm6415-201ENSMUST00000118488 348 ntBASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Gm25144-201ENSMUST00000179561 110 ntBASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Gm25352-201ENSMUST00000179815 110 ntBASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.61□□□□□ -0.39
Vps9d1Q8C190 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.61□□□□□ -0.39
Vps9d1Q8C190 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Dupd1-202ENSMUST00000224735 548 ntBASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps9d1Q8C190 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms