Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Mir1982-201ENSMUST00000157368 74 ntBASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 AY702102-202ENSMUST00000194651 1173 ntBASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk5rap1Q8BTW8 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm11803-201ENSMUST00000119966 444 ntBASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Proscos-202ENSMUST00000178990 666 ntBASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm45784-201ENSMUST00000188360 142 ntBASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap1Q8BTW8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk5rap1Q8BTW8 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk5rap1Q8BTW8 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk5rap1Q8BTW8 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk5rap1Q8BTW8 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk5rap1Q8BTW8 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk5rap1Q8BTW8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.77□□□□□ -0.36
Cdk5rap1Q8BTW8 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm10156-201ENSMUST00000122364 462 ntBASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm29127-201ENSMUST00000188304 517 ntBASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap1Q8BTW8 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap1Q8BTW8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms