Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Gm12859-201ENSMUST00000117834 427 ntBASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.06□□□□□ -0.32
Cpsf4Q8BQZ5 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms