Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smco3Q8BQM7 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Gm15957-201ENSMUST00000118893 974 ntBASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Gm11543-201ENSMUST00000120758 370 ntBASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
Smco3Q8BQM7 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Mir5131-201ENSMUST00000175426 93 ntBASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Gm44608-201ENSMUST00000206827 855 ntBASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Pck2-205ENSMUST00000226352 2784 ntBASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms