Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc40Q8BI79 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Mir6956-201ENSMUST00000183598 62 ntBASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Gm7775-201ENSMUST00000218871 853 ntBASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Gm9063-201ENSMUST00000223299 582 ntBASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.09□□□□□ -0.15
Ccdc40Q8BI79 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc40Q8BI79 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc40Q8BI79 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Ccdc40Q8BI79 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc40Q8BI79 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc40Q8BI79 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc40Q8BI79 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc40Q8BI79 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc40Q8BI79 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc40Q8BI79 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Ccdc40Q8BI79 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Ccdc40Q8BI79 Gm44872-201ENSMUST00000207864 420 ntBASIC14.08□□□□□ -0.16
Ccdc40Q8BI79 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc40Q8BI79 Gm5867-201ENSMUST00000063197 592 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms