Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm43930-201ENSMUST00000203868 845 ntBASIC13.3□□□□□ -0.28
Ubp1Q811S7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.29□□□□□ -0.28
Ubp1Q811S7 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.29□□□□□ -0.28
Ubp1Q811S7 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Gm18307-201ENSMUST00000206864 949 ntBASIC13.29□□□□□ -0.28
Ubp1Q811S7 Gm45668-201ENSMUST00000211271 493 ntBASIC13.29□□□□□ -0.28
Ubp1Q811S7 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.29□□□□□ -0.28
Ubp1Q811S7 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.29□□□□□ -0.28
Ubp1Q811S7 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.29□□□□□ -0.28
Ubp1Q811S7 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ubp1Q811S7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.28□□□□□ -0.28
Ubp1Q811S7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Gm18018-201ENSMUST00000198273 408 ntBASIC13.28□□□□□ -0.28
Ubp1Q811S7 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.28□□□□□ -0.28
Ubp1Q811S7 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.28□□□□□ -0.28
Ubp1Q811S7 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ubp1Q811S7 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms