Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.44□□□□□ -0.26
Rpp38Q80UU2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rpp38Q80UU2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.44□□□□□ -0.26
Rpp38Q80UU2 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpp38Q80UU2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Rpp38Q80UU2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpp38Q80UU2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rpp38Q80UU2 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpp38Q80UU2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpp38Q80UU2 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rpp38Q80UU2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpp38Q80UU2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpp38Q80UU2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpp38Q80UU2 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Grk6-205ENSMUST00000224653 2976 ntBASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Gm5687-201ENSMUST00000118252 640 ntBASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpp38Q80UU2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.41□□□□□ -0.26
Rpp38Q80UU2 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpp38Q80UU2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpp38Q80UU2 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpp38Q80UU2 Acot6-202ENSMUST00000222921 3622 ntBASIC13.41□□□□□ -0.26
Rpp38Q80UU2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpp38Q80UU2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpp38Q80UU2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Rpp38Q80UU2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpp38Q80UU2 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpp38Q80UU2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Rpp38Q80UU2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpp38Q80UU2 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.41□□□□□ -0.26
Rpp38Q80UU2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.41□□□□□ -0.26
Rpp38Q80UU2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpp38Q80UU2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.41□□□□□ -0.26
Rpp38Q80UU2 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rpp38Q80UU2 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.41□□□□□ -0.26
Rpp38Q80UU2 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.41□□□□□ -0.26
Rpp38Q80UU2 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms