Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Mir483-201ENSMUST00000093631 73 ntBASIC11.33□□□□□ -0.6
Rif1Q6PR54 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.33□□□□□ -0.6
Rif1Q6PR54 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.33□□□□□ -0.6
Rif1Q6PR54 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Gm23270-201ENSMUST00000104055 131 ntBASIC11.33□□□□□ -0.6
Rif1Q6PR54 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Gm12165-201ENSMUST00000117047 342 ntBASIC11.33□□□□□ -0.6
Rif1Q6PR54 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.33□□□□□ -0.6
Rif1Q6PR54 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Gm8492-201ENSMUST00000182375 987 ntBASIC11.33□□□□□ -0.6
Rif1Q6PR54 Gm34023-201ENSMUST00000195539 217 ntBASIC11.33□□□□□ -0.6
Rif1Q6PR54 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.33□□□□□ -0.6
Rif1Q6PR54 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.33□□□□□ -0.6
Rif1Q6PR54 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.32□□□□□ -0.6
Rif1Q6PR54 Gm12899-201ENSMUST00000120565 551 ntBASIC11.32□□□□□ -0.6
Rif1Q6PR54 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.32□□□□□ -0.6
Rif1Q6PR54 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Mt1-202ENSMUST00000211807 1085 ntBASIC11.32□□□□□ -0.6
Rif1Q6PR54 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rif1Q6PR54 Gm13045-201ENSMUST00000119019 712 ntBASIC11.31□□□□□ -0.6
Rif1Q6PR54 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.31□□□□□ -0.6
Rif1Q6PR54 Gm10051-201ENSMUST00000145209 414 ntBASIC11.31□□□□□ -0.6
Rif1Q6PR54 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.31□□□□□ -0.6
Rif1Q6PR54 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.31□□□□□ -0.6
Rif1Q6PR54 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.31□□□□□ -0.6
Rif1Q6PR54 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.31□□□□□ -0.6
Rif1Q6PR54 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms