Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Smarcc2Q6PDG5 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Smarcc2Q6PDG5 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Smarcc2Q6PDG5 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Smarcc2Q6PDG5 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Gm12341-201ENSMUST00000119724 503 ntBASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Smarcc2Q6PDG5 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Gm9908-201ENSMUST00000211534 448 ntBASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Gm7653-201ENSMUST00000214567 508 ntBASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Gm24447-201ENSMUST00000083977 338 ntBASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Smarcc2Q6PDG5 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 Gm12403-201ENSMUST00000121384 959 ntBASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcc2Q6PDG5 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms