Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ShbQ6PD21 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ShbQ6PD21 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ShbQ6PD21 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ShbQ6PD21 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ShbQ6PD21 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ShbQ6PD21 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.33□□□□□ -0.11
ShbQ6PD21 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
ShbQ6PD21 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShbQ6PD21 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShbQ6PD21 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ShbQ6PD21 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShbQ6PD21 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShbQ6PD21 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShbQ6PD21 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.33□□□□□ -0.12
ShbQ6PD21 Gm13736-201ENSMUST00000119272 253 ntBASIC14.33□□□□□ -0.12
ShbQ6PD21 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ShbQ6PD21 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ShbQ6PD21 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ShbQ6PD21 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.33□□□□□ -0.12
ShbQ6PD21 Gm45219-201ENSMUST00000205602 465 ntBASIC14.33□□□□□ -0.12
ShbQ6PD21 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.33□□□□□ -0.12
ShbQ6PD21 AC125486.1-201ENSMUST00000218701 320 ntBASIC14.33□□□□□ -0.12
ShbQ6PD21 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.33□□□□□ -0.12
ShbQ6PD21 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.33□□□□□ -0.12
ShbQ6PD21 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC14.33□□□□□ -0.12
ShbQ6PD21 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShbQ6PD21 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShbQ6PD21 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShbQ6PD21 Ntng1-201ENSMUST00000051253 327 ntBASIC14.33□□□□□ -0.12
ShbQ6PD21 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShbQ6PD21 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ShbQ6PD21 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.33□□□□□ -0.12
ShbQ6PD21 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShbQ6PD21 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShbQ6PD21 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ShbQ6PD21 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ShbQ6PD21 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShbQ6PD21 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ShbQ6PD21 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ShbQ6PD21 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ShbQ6PD21 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShbQ6PD21 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ShbQ6PD21 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ShbQ6PD21 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.32□□□□□ -0.12
ShbQ6PD21 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ShbQ6PD21 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShbQ6PD21 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShbQ6PD21 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShbQ6PD21 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ShbQ6PD21 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShbQ6PD21 Sybu-209ENSMUST00000228639 4113 ntBASIC14.32□□□□□ -0.12
ShbQ6PD21 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShbQ6PD21 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
ShbQ6PD21 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.32□□□□□ -0.12
ShbQ6PD21 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ShbQ6PD21 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.32□□□□□ -0.12
ShbQ6PD21 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShbQ6PD21 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ShbQ6PD21 Gm10312-201ENSMUST00000078515 489 ntBASIC14.32□□□□□ -0.12
ShbQ6PD21 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.32□□□□□ -0.12
ShbQ6PD21 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ShbQ6PD21 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShbQ6PD21 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShbQ6PD21 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ShbQ6PD21 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShbQ6PD21 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShbQ6PD21 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ShbQ6PD21 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.32□□□□□ -0.12
ShbQ6PD21 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ShbQ6PD21 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShbQ6PD21 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShbQ6PD21 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.31□□□□□ -0.12
ShbQ6PD21 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
ShbQ6PD21 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShbQ6PD21 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ShbQ6PD21 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShbQ6PD21 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.31□□□□□ -0.12
ShbQ6PD21 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShbQ6PD21 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShbQ6PD21 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShbQ6PD21 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShbQ6PD21 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShbQ6PD21 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShbQ6PD21 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
ShbQ6PD21 Gm13045-201ENSMUST00000119019 712 ntBASIC14.31□□□□□ -0.12
ShbQ6PD21 Gm6963-201ENSMUST00000147879 379 ntBASIC14.31□□□□□ -0.12
ShbQ6PD21 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.31□□□□□ -0.12
ShbQ6PD21 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.31□□□□□ -0.12
ShbQ6PD21 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.31□□□□□ -0.12
ShbQ6PD21 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.31□□□□□ -0.12
ShbQ6PD21 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.31□□□□□ -0.12
ShbQ6PD21 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShbQ6PD21 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShbQ6PD21 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShbQ6PD21 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.31□□□□□ -0.12
ShbQ6PD21 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShbQ6PD21 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShbQ6PD21 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ShbQ6PD21 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 768.4 ms