Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm14127-201ENSMUST00000117906 678 ntBASIC12.97□□□□□ -0.33
Sdc3Q64519 Gm13689-201ENSMUST00000119360 685 ntBASIC12.97□□□□□ -0.33
Sdc3Q64519 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.97□□□□□ -0.33
Sdc3Q64519 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.97□□□□□ -0.33
Sdc3Q64519 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.97□□□□□ -0.33
Sdc3Q64519 Gm27701-201ENSMUST00000184498 110 ntBASIC12.97□□□□□ -0.33
Sdc3Q64519 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.97□□□□□ -0.33
Sdc3Q64519 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.97□□□□□ -0.33
Sdc3Q64519 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sdc3Q64519 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sdc3Q64519 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sdc3Q64519 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sdc3Q64519 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Sdc3Q64519 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sdc3Q64519 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sdc3Q64519 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.97□□□□□ -0.33
Sdc3Q64519 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sdc3Q64519 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Sdc3Q64519 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.97□□□□□ -0.33
Sdc3Q64519 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sdc3Q64519 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sdc3Q64519 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sdc3Q64519 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sdc3Q64519 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc3Q64519 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc3Q64519 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc3Q64519 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc3Q64519 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc3Q64519 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc3Q64519 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc3Q64519 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc3Q64519 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc3Q64519 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc3Q64519 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc3Q64519 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc3Q64519 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc3Q64519 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.96□□□□□ -0.33
Sdc3Q64519 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.96□□□□□ -0.33
Sdc3Q64519 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc3Q64519 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.96□□□□□ -0.33
Sdc3Q64519 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.96□□□□□ -0.33
Sdc3Q64519 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sdc3Q64519 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc3Q64519 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Sdc3Q64519 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Sdc3Q64519 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc3Q64519 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sdc3Q64519 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sdc3Q64519 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Sdc3Q64519 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sdc3Q64519 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sdc3Q64519 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sdc3Q64519 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.96□□□□□ -0.34
Sdc3Q64519 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sdc3Q64519 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.96□□□□□ -0.34
Sdc3Q64519 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Sdc3Q64519 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sdc3Q64519 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.96□□□□□ -0.34
Sdc3Q64519 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sdc3Q64519 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sdc3Q64519 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sdc3Q64519 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.95□□□□□ -0.34
Sdc3Q64519 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sdc3Q64519 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.95□□□□□ -0.34
Sdc3Q64519 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sdc3Q64519 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Sdc3Q64519 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Sdc3Q64519 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.95□□□□□ -0.34
Sdc3Q64519 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sdc3Q64519 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.95□□□□□ -0.34
Sdc3Q64519 Gm26464-201ENSMUST00000157094 305 ntBASIC12.95□□□□□ -0.34
Sdc3Q64519 Gm18187-201ENSMUST00000196476 984 ntBASIC12.95□□□□□ -0.34
Sdc3Q64519 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.95□□□□□ -0.34
Sdc3Q64519 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.95□□□□□ -0.34
Sdc3Q64519 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.95□□□□□ -0.34
Sdc3Q64519 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sdc3Q64519 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms